A dataset containing phenotypes for the Panicum virgatum diversity panel. The variables are as follows:

data(pvdiv_phenotypes)

Format

A data frame with 1114 rows and 13 variables

Details

  • PLANT_ID. ID of the Panicum virgatum genotype sequenced in the diversity panel.

  • GWAS_CT. The number of times that genotype was clonally propagated and planted at these common gardens.

  • MAT. Mean annual temperature at the genotype's location of origin.

  • bio17. Precipitation in the driest quarter at the genotype's location of origin.

  • bio4. Temperature seasonality at the genotype's location of origin.

  • bio16. Precipitation in the wettest quarter at the genotype's location of origin.

  • AHM. Annual heat moisture index, calculated as (MAT+10)/(MAP/1000), at the genotype's location of origin.

  • bio2. Mean diurnal temperature range at the genotype's location of origin.

  • bio5. Max temperature of the warmest month at the genotype's location of origin.

  • FRAC_SRV_THREE. Fraction of individuals surviving winter 2018/2019 at three northern gardens (BRKG, LINC, CLMB).

  • CLMB_BIOMASS. Biomass at the end of the 2019 season in Columbia, Missouri.

  • KBSM_BIOMASS. Biomass at the end of the 2019 season in Hickory Corners, Michigan (Kellog Biological Station).

  • PKLE_BIOMASS. Biomass at the end of the 2019 season in Austin, Texas (Pickle Research Campus).

Author

Alice MacQueen alice.macqueen@utexas.edu